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To see an article, click its [Accepted Manuscript] link. To review many abstracts, check the boxes to the left of the titles you want, and click the 'Get All Checked Abstract(s)' button. To see one abstract at a time, click its [Abstract] link.

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Karina Tveen Jensen, giovanni Strambini, Margherita Gonnelli, Jaap Broos, and J Baz Jackson

MUTATIONS IN TRANSHYDROGENASE CHANGE THE FLUORESCENCE EMISSION STATE OF TRP-72 FROM 1La to 1Lb
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.134650 [Abstract] [Accepted Manuscript]  

Deepak Sharma, Gang Feng, Dingyue Khor, Georgi Genchev, Hui Lu, and Hongbin Li

Stabilization provided by neighboring strands is critical for the mechanical stability of proteins
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.134072 [Abstract] [Accepted Manuscript]  

Michael I Smith, James S Sharp, and Clive J Roberts

Insulin fibril nucleation: the role of prefibrillar aggregates
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.131482 [Abstract] [Accepted Manuscript]  

Jeremy L. England and Vijay S. Pande

Potential for modulation of the hydrophobic effect inside chaperonins
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.131037 [Abstract] [Accepted Manuscript]  

Simon Schweizer and Jennifer Reed

Effect of variation of the strength of the aromatic interactions of tryptophan on the cooperative structural refolding behavior of a peptide from HIV 1
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.107.126375 [Abstract] [Accepted Manuscript]  

Jingxian Liu and Jianxing Song

NMR Evidence for Forming Highly-Populated Helical Conformations in the Partially-Folded hNck2 SH3 Domain
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.107.125641 [Abstract] [Accepted Manuscript]  

Kate M. Nairn, Russell E. Lyons, Roger J. Mulder, Stephen T. Mudie, David J. Cookson, Emmanuelle Lesieur, Misook Kim, Deborah Lau, Fiona H. Scholes, and Christopher M. Elvin

A synthetic resilin is largely unstructured
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.107.119107 [Abstract] [Accepted Manuscript]  

Xingding Zhou, Tien-Chye Tan, Suresh Valiyaveettil, Mei-Lin Go, R. Manjunatha Kini, Adrian Velazquez-Campoy, and Jayaraman Sivaraman

Structural Characterization of Myotoxic Ecarpholin S from Echis carinatus Venom
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.107.117747 [Abstract] [Accepted Manuscript]  

Bruno Zappone, Philipp Thurner, Jonathan Adams, Georg E. Fantner, and Paul K. Hansma

Effect of Ca²⁺ ions on the adhesion and mechanical properties of adsorbed layers of human Osteopontin
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.108.135889 [Abstract] [Accepted Manuscript]  

Carlos Mattea, Johan Qvist, and Bertil Halle

Dynamics at the Protein-Water Interface from ¹⁷O Spin Relaxation in Deeply Supercooled Solutions
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.108.135194 [Abstract] [Accepted Manuscript]  

Mathias Grote, Enrica Bordignon, Yevhen Polyhach, Gunnar Jeschke, Heinz-Jürgen Steinhoff, and Erwin Schneider

A comparative EPR study of the nucleotide-binding domains' catalytic cycle in the assembled maltose ABC-importer
Biophys. J. BioFAST: June 20, 2008. doi:10.1529/biophysj.108.132456 [Abstract] [Accepted Manuscript]  

Hiroshi Nakagawa, Yasumasa Joti, Akio Kitao, and Mikio Kataoka

Hydration affects both harmonic and anharmonic nature of protein dynamics
Biophys. J. BioFAST: June 13, 2008. doi:10.1529/biophysj.107.128546 [Abstract] [Accepted Manuscript]  

Dragomir N. Ganchev, Nathan J. Cobb, Krystyna Surewicz, and Witold K. Surewicz

Nanomechanical Properties of Human Prion Protein Amyloid as Probed by Force Spectroscopy
Biophys. J. BioFAST: June 6, 2008. doi:10.1529/biophysj.108.133108 [Abstract] [Accepted Manuscript]  

Atsushi Matsumoto, Tetsuji Kamata, Junichi Takagi, Kenji Iwasaki, and Kei Yura

Key interactions in integrin ectodomain responsible for global conformational change detected by elastic network normal mode analysis
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.131045 [Abstract] [Accepted Manuscript]  

Matt Ferguson, Kondury Prasad, Hacene Boukari, Dan Sackett, Susan Krueger, Eileen Lafer, and Ralph Nossal

Clathrin Triskelia Show Evidence of Molecular Flexibility
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.107.126342 [Abstract] [Accepted Manuscript] [Supplement]  

Enrico Di Stasio, Stefano Lancellotti, Flora Peyvandi, Roberta Palla, Pier Mannuccio Mannucci, and Raimondo De Cristofaro

MECHANISTIC STUDIES ON ADAMTS-13 CATALYSIS
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.108.131532 [Abstract] [Accepted Manuscript] [Supplement]  

Yechun Xu, Jacques Philippe Colletier, Martin Weik, Hualiang Jiang, John Moult, Israel Silman, and Joel L Sussman

Flexibility of Aromatic Residues in the Active-Site Gorge of Acetylcholinesterase: X-ray vs MD
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.108.129601 [Abstract] [Accepted Manuscript]  

Yelena A. Arnautova and Harold A. Scheraga

Use of decoys to optimize an all-atom force field including hydration
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.108.133587 [Abstract] [Accepted Manuscript]  

Seung Yup Lee and Jeffrey Skolnick

Benchmarking of TASSER_2.0: An improved protein structure prediction algorithm with more accurate predicted contact restraints
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.108.129759 [Abstract] [Accepted Manuscript] [Supplement]  

Nickolay Zhadin, Miriam Gulotta, and Robert Callender

Probing the Role of Dynamics in Hydride Transfer Catalyzed by Lactate Dehydrogenase
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.108.132464 [Abstract] [Accepted Manuscript] [Supplement]  

Alfonso De Simone, Luciana Esposito, Carlo Pedone, and Luigi Vitagliano

Insights into Stability and Toxicity of Amyloid-Like Oligomers by Replica Exchange Molecular Dynamics Analyses
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.108.129213 [Abstract] [Accepted Manuscript] [Supplement]  

Aviv Paz, Tzviya Zeev-Ben-Mordehai, Martin Lundqvist, Eilon Sherman, Efstratios Mylonas, Lev Weiner, Gilad Haran, Dmitri Svergun, Frans Mulder, Joel Sussman, and Israel Silman

BIOPHYSICAL CHARACTERIZATION OF THE UNSTRUCTURED CYTOPLASMIC DOMAIN OF THE HUMAN NEURONAL ADHESION PROTEIN NEUROLIGIN 3
Biophys. J. BioFAST: May 2, 2008. doi:10.1529/biophysj.107.126995 [Abstract] [Accepted Manuscript] [Supplement]  

Estefania Hurtado-Gomez, Olga Abian, F. Javier Munoz, Maria J Hernaiz, Adrian Velazquez-Campoy, and Jose Luis Neira

Defining the epitope region of a peptide from the Streptomyces coelicolor phosphoenolpyruvate: sugar phosphotransferase system able to bind to the enzyme I
Biophys. J. BioFAST: May 2, 2008. doi:10.1529/biophysj.107.126664 [Abstract] [Accepted Manuscript]  

Walter Stelzer, Bernhard Poschner, Holger Stalz, Albert Heck, and Dieter Langosch

Sequence-specific conformational flexibility of SNARE transmembrane helices probed by hydrogen/deuterium exchange
Biophys. J. BioFAST: May 2, 2008. doi:10.1529/biophysj.108.132928 [Abstract] [Accepted Manuscript] [Supplement]  

Ron M. Finn, Kristen Browne, Kim C. Hodgson, and Juan Ausio

sNASP, a histone H1-specific eukaryotic chaperone dimer that facilitates chromatin assembly
Biophys. J. BioFAST: May 2, 2008. doi:10.1529/biophysj.108.130021 [Abstract] [Accepted Manuscript]  

Matjaz Boncina, Jurij Rescic, and Vojko Vlachy

Solubility of Lysozyme in PEG-Electrolyte Mixtures: the Depletion Interaction and Ion-Specific Effects
Biophys. J. BioFAST: April 25, 2008. doi:10.1529/biophysj.108.128694 [Abstract] [Accepted Manuscript]  

Zhongzhou Chen, Jizhong Lou, Cheng Zhu, and Klaus Schulten

Flow Induced Structural Transition in the -switch Region of Glycoprotein Ib
Biophys. J. BioFAST: April 25, 2008. doi:10.1529/biophysj.108.132324 [Abstract] [Accepted Manuscript] [Supplement]  

Nunilo Cremades and Javier Sancho

Molten Globule and Native State Ensemble of Helicobacter pylori Flavodoxin. Can crowding, osmolytes or cofactors stabilize the native conformation relative to the molten globule?
Biophys. J. BioFAST: April 25, 2008. doi:10.1529/biophysj.108.130153 [Abstract] [Accepted Manuscript]  

Olga Vites, Ernst-Ludwig Florin, and Reinhard Jahn

Docking of liposomes to planar surfaces mediated by trans-SNARE complexes
Biophys. J. BioFAST: April 18, 2008. doi:10.1529/biophysj.108.129510 [Abstract] [Accepted Manuscript]  

Nathalie Colloc'h, Laure Gabison, Gerald Monard, Muhanad Altarsha, Mohamed Chiadmi, Guillaume Marassio, Jana Sopkova-de Oliveira Santos, Mohamed El Hajji, Bertrand Castro, Jacques H. Abraini, and Thierry Prangé

Oxygen pressurized X-ray crystallography: Probing the dioxygen binding site in cofactor-less urate oxidase and implications to its catalytic mechanism
Biophys. J. BioFAST: March 28, 2008. doi:10.1529/biophysj.107.122184 [Abstract] [Accepted Manuscript] [Supplement]  

Gabriel Gibrat, Liliane Assairi, Yves Blouquit, Constantin T Craescu, and Marie-Claire Bellissent-Funel

Biophysical study of thermal denaturation of apo-calmodulin: II- Dynamics of native and unfolded states
Biophys. J. BioFAST: January 25, 2008. doi:10.1529/biophysj.107.120147 [Abstract] [Accepted Manuscript]  

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Stefan Legewie, Dennis Dienst, Annegret Wilde, Hanspeter Herzel, and Ilka Axmann

Small RNAs Establish Delays and Temporal Thresholds in Gene Expression
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.133819 [Abstract] [Accepted Manuscript]  

Jong-chin Lin, Daniel L Cox, and Rajiv R Singh

Theoretical Study of DNA Damage Recognition via Electron Transfer from the [4Fe-4S] Complex of MutY
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.132183 [Abstract] [Accepted Manuscript]  

Cristina S. Pereira and Philippe H. Hunenberger

The effect of trehalose on a phospholipid membrane under mechanical stress
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.131656 [Abstract] [Accepted Manuscript]  

Xin Fang, William E. Bentley, and Evanghelos Zafiriou

Stochastic Modeling of Gene Positive Autoregulation Networks Involving Signal Molecules
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.107.127175 [Abstract] [Accepted Manuscript]  

Piotras Cimmperman, Lina Baranauskiene, Simona Jachimoviciute, Jelena Jachno, Jolanta Torresan, Vilma Michailoviene, Jurgita Matuliene, Jolanta Sereikaite, Vladas Bumelis, and Daumantas Matulis

A Quantitative Model of Thermal Stabilization and Destabilization of Proteins by Ligands
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.134973 [Abstract] [Accepted Manuscript]  

Florian Milde, Michael Bergdorf, and Petros Koumoutsakos

A Hybrid Model for 3D Simulations of Sprouting Angiogenesis
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.107.124511 [Abstract] [Accepted Manuscript]  

Jane H. Sheeba, Aneta Stefanovska, and Peter V.E. McClintock

Neuronal synchrony during anaesthesia - A thalamocortical model
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.108.134635 [Abstract] [Accepted Manuscript]  

Elizabeth J. Denning and Thomas B. Woolf

Double Bilayers and Transmembrane Gradients: A Molecular Dynamics Study of a Highly Charged Peptide
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.108.134049 [Abstract] [Accepted Manuscript]  

Julio Kovacs, Mark Yeager, and Ruben Abagyan

Damped-Dynamics Flexible Fitting
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.108.132357 [Abstract] [Accepted Manuscript]  

Michèle Koenigsberger, Roger Sauser, Dominique Seppey, Jean-Louis Bény, and Jean-Jacques Meister

Calcium dynamics and vasomotion in arteries subject to isometric, isobaric, and isotonic conditions
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.108.131136 [Abstract] [Accepted Manuscript]  

Joshua S Weitz, Yuriy Mileyko, Richard I Joh, and Eberhard O Voit

Collective decision making in bacterial viruses
Biophys. J. BioFAST: June 20, 2008. doi:10.1529/biophysj.108.133694 [Abstract] [Accepted Manuscript]  

Hao Wang, Jason de Joannis, Yong Jiang, Jeffrey C. Gaulding, Birgit Albrecht, Fuchang Yin, Kunal Khanna, and James T. Kindt

Bilayer edge and curvature effects on partitioning of lipids by tail length: atomistic simulations
Biophys. J. BioFAST: June 20, 2008. doi:10.1529/biophysj.108.131409 [Abstract] [Accepted Manuscript] [Supplement]  

Andras Szabo, Elod Mehes, Edina Kosa, and Andras Czirok

Multicellular sprouting in vitro
Biophys. J. BioFAST: June 20, 2008. doi:10.1529/biophysj.108.129668 [Abstract] [Accepted Manuscript] [Supplement]  

Joanna I. Sulkowska and Marek Cieplak

Selection of optimal variants of Go-like models of proteins through studies of stretching
Biophys. J. BioFAST: June 20, 2008. doi:10.1529/biophysj.107.127233 [Abstract] [Accepted Manuscript]  

Courtney L. Lopreore, Thomas M. Bartol, Jay S. Coggan, Daniel X. Keller, Gina E. Sosinsky, Mark H. Ellisman, and Terrence J. Sejnowski

Computational modeling of 3D electrodiffusion in biological systems: Application to the node of Ranvier
Biophys. J. BioFAST: June 13, 2008. doi:10.1529/biophysj.108.132167 [Abstract] [Accepted Manuscript]  

R. E. Lee DeVille and Eric Vanden-Eijnden

Regular gaits and optimal velocities for motor proteins
Biophys. J. BioFAST: June 13, 2008. doi:10.1529/biophysj.108.130674 [Abstract] [Accepted Manuscript]  

Jason E Shoemaker and Francis J Doyle III

Identifying Fragilities in Biochemical Networks: Robust Performance Analysis of Fas Signaling-Induced Apoptosis
Biophys. J. BioFAST: June 6, 2008. doi:10.1529/biophysj.107.123398 [Abstract] [Accepted Manuscript]  

Genevieve Dupont, Aurelie Abou-Lovergne, and Laurent Combettes

Stochastic aspects of oscillatory Ca²⁺ dynamics in hepatocytes
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.133777 [Abstract] [Accepted Manuscript]  

M. Hamsa Priya, Jindal K. Shah, Dilip Asthagiri, and Michael E. Paulaitis

Distinguishing Thermodynamic and Kinetic Views of the Preferential Hydration of Protein Surfaces
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.133553 [Abstract] [Accepted Manuscript]  

Gregg Lois, Jerzy Blawzdziewicz, and Corey S O'Hern

Reliable protein folding on complex energy landscapes: the free energy reaction path
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.133132 [Abstract] [Accepted Manuscript] [Supplement]  

Allison N Dickey and Roland Faller

Examining the Contributions of Lipid Shape and Headgroup Charge on Bilayer Behavior
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.107.128074 [Abstract] [Accepted Manuscript]  

Ben Corry and Dylan Jayatilaka

Simulation of structure, orientation and energy transfer between AlexaFluor molecules attached to MscL
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.107.126243 [Abstract] [Accepted Manuscript]  

Dirk Gillespie and Dezso Boda

The anomalous mole fraction effect in calcium channels: A measure of preferential selectivity
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.107.127977 [Abstract] [Accepted Manuscript]  

Harianto Tjong and Huan-Xiang Zhou

Prediction of Protein Solubility from Calculation of Transfer Free Energy
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.107.127746 [Abstract] [Accepted Manuscript]  

Clark A Miller and Daniel A Beard

The Effects of Reversibility and Noise on Stochastic Phosphorylation Cycles and Cascades
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.107.126185 [Abstract] [Accepted Manuscript]  

Heiko Enderling, Nelson R Alexander, Emily S Clark, Kevin Branch, Lourdes Estrada, Cornelia Crooke, Jerome Jourquin, Nichole A Lobdell, Muhammad H Zaman, Scott A Guelcher, Alexander Robertson Allan Anderson, and Alissa M Weaver

Dependence of invadopodia function on collagen fiber spacing and crosslinking: computational modeling and experimental evidence
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.133199 [Abstract] [Accepted Manuscript] [Supplement]  

Anatoly M. Ruvinsky and Ilya A. Vakser

Chasing Funnels on Protein-Protein Energy Landscapes at Different Resolutions
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.132977 [Abstract] [Accepted Manuscript]  

Kohei Eguchi, Mitsumasa Yoda, Tomoki P Terada, and Masaki Sasai

Mechanism of robust circadian oscillation of KaiC phosphorylation in vitro
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.107.127555 [Abstract] [Accepted Manuscript] [Supplement]  

Vasili Hauryliuk, Sebastian Hansson, and Måns Ehrenberg

Co-factor dependent conformational switching of GTPases
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.107.127290 [Abstract] [Accepted Manuscript]  

Luigi Catacuzzeno, Bernard Fioretti, and Fabio Franciolini

MODELLING STUDY OF THE EFFECTS OF MEMBRANE SURFACE CHARGE ON CALCIUM MICRODOMAINS AND NEUROTRANSMITTER RELEASE
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.107.124909 [Abstract] [Accepted Manuscript] [Supplement]  

Hiroaki Chiba, Natalie Schneider, Satoshi Matsuoka, and Akinori Noma

A simulation study on the activation of cardiac CaMKII -isoform and its regulation by phosphatases
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.107.118505 [Abstract] [Accepted Manuscript]  

Shelly Tzlil, Diana Murray, and Avinoam Ben-Shaul

The "Electrostatic-Switch" Mechanism: Monte Carlo Study of MARCKS-Membrane Interaction
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.108.132522 [Abstract] [Accepted Manuscript]  

Igor Novak, Boris Slepchenko, and Alexander Mogilner

Quantitative analysis of G-actin transport in motile cells
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.108.130096 [Abstract] [Accepted Manuscript]  

Michael I. Monine and Jason M. Haugh

Signal Transduction at Point-blank Range: Analysis of a Spatial Coupling Mechanism for Pathway Crosstalk
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.108.128892 [Abstract] [Accepted Manuscript] [Supplement]  

Takako Takeda and Dmitri Klimov

Temperature induced dissociation of A monomers from amyloid fibril
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.108.131698 [Abstract] [Accepted Manuscript]  

George S. B. Williams, Marco A Huertas, Eric A Sobie, M. Saleet Jafri, and Gregory D. Smith

Moment Closure for Local Control Models of Calcium-Induced Calcium Release in Cardiac Myocytes
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.107.125948 [Abstract] [Accepted Manuscript]  

Ellen Krasik, Kelly E. Caputo, and Daniel A. Hammer

Adhesive Dynamics Simulation of Neutrophil Arrest with Stochastic Activation
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.107.119677 [Abstract] [Accepted Manuscript]  

Agusti Emperador, Oliver Carrillo, Manuel Rueda, and Modesto Orozco

EXPLORING THE SUITABILITY OF COARSE-GRAINED TECHNIQUES FOR THE REPRESENTATION OF PROTEIN DYNAMICS
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.107.119115 [Abstract] [Accepted Manuscript] [Supplement]  

Sherry-Ann Brown, Frank Morgan, James Watras, and Leslie M. Loew

Analysis of Phosphatidylinositol-4,5-bisphosphate Signaling in Cerebellar Purkinje Spines
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.108.130195 [Abstract] [Accepted Manuscript] [Supplement]  

Stephanie R Taylor, Francis J Doyle III, and Linda R Petzold

Oscillator Model Reduction Preserving the Phase Response: Application to the Circadian Clock
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.107.128678 [Abstract] [Accepted Manuscript] [Supplement]  

Mattia Falconi, Francesco Oteri, Tommaso Eliseo, Daniel O. Cicero, and Alessandro Desideri

MD Simulations of Papillomavirus DNA-E2 Protein Complexes Hints at a Protein Structural Code for DNA Deformation
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.108.130849 [Abstract] [Accepted Manuscript] [Supplement]  

Manami Nishizawa and Kazuhisa Nishizawa

Molecular Dynamics Simulation of Kv channel Voltage Sensor Helix in a Lipid Membrane with Applied Electric Field
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.108.130658 [Abstract] [Accepted Manuscript] [Supplement]  

Santhosh Palani and Casim A. Sarkar

Positive Receptor Feedback during Lineage Commitment Can Generate Ultrasensitivity to Ligand and Confer Robustness to a Bistable Switch
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.107.120600 [Abstract] [Accepted Manuscript] [Supplement]  

Chze-Ling Wee, Kia Balali-Mood, David Gavaghan, and Mark S.P. Sansom

The Interaction of Phospholipase A2 with a Phospholipid Bilayer: Coarse-Grained Molecular Dynamics Simulations
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.107.123190 [Abstract] [Accepted Manuscript]  

Charles Wolgemuth

Collective swimming and the dynamics of bacterial turbulence
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.107.118257 [Abstract] [Accepted Manuscript]  

Seth Weinberg, Shahriar Iravanian, and Leslie Tung

Representation of Collective Electrical Behavior Of Cardiac Cell Sheets
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.107.128207 [Abstract] [Accepted Manuscript]  

Haijun Gong, Debrup Sengupta, Adam D. Linstedt, and Russell Schwartz

Simulated de novo assembly of Golgi compartments by selective cargo capture during vesicle budding and targeted vesicle fusion
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.107.127498 [Abstract] [Accepted Manuscript]  

Kei Moritsugu and Jeremy C. Smith

REACH Coarse-Grained Biomolecular Simulation: Transferability between Different Protein Structural Classes
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.108.131714 [Abstract] [Accepted Manuscript]  

Songwan Jin, Zsolt Zador, and Alan S. Verkman

RANDOM-WALK MODEL OF DIFFUSION IN 3-DIMENSIONS IN BRAIN EXTRACELLULAR SPACE: COMPARISON WITH MICROFIBEROPTIC PHOTOBLEACHING MEASUREMENTS
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.108.131466 [Abstract] [Accepted Manuscript] [Supplement]  

Taira Vora, David Bisset, and Shin-Ho Chung

Conduction of Na+ and K+ through the NaK Channel: Molecular and Brownian Dynamics Studies
Biophys. J. BioFAST: May 2, 2008. doi:10.1529/biophysj.107.126722 [Abstract] [Accepted Manuscript]  

Philippos K Tsourkas, Marjorie L Longo, and Subhadip Raychaudhuri

Monte Carlo study of single molecule diffusion can elucidate the mechanism of B cell synapse formation
Biophys. J. BioFAST: May 2, 2008. doi:10.1529/biophysj.107.122564 [Abstract] [Accepted Manuscript]  

Jianping Lin, Nadrian C Seeman, and Nagarajan Vaidehi

Molecular dynamics simulations of insertion of chemically modified DNA nanostructures into water-chloroform interface
Biophys. J. BioFAST: May 2, 2008. doi:10.1529/biophysj.107.119230 [Abstract] [Accepted Manuscript] [Supplement]  

Hwankyu Lee, Richard M. Venable, Alexander D. MacKerell, Jr., and Richard W. Pastor

Molecular dynamics studies of polyethylene oxide and polyethylene glycol: Hydrodynamic radius and shape anisotropy
Biophys. J. BioFAST: May 2, 2008. doi:10.1529/biophysj.108.133025 [Abstract] [Accepted Manuscript]  

Longhua Hu, Alexander Y. Grosberg, and Robijn Bruinsma

Are DNA Transcription Factor Proteins Maxwellian Demons?
Biophys. J. BioFAST: May 2, 2008. doi:10.1529/biophysj.108.129825 [Abstract] [Accepted Manuscript]  

Andras Szilagyi, Daniel Gyorffy, and Peter Zavodszky

The twilight zone between protein order and disorder
Biophys. J. BioFAST: April 25, 2008. doi:10.1529/biophysj.108.131151 [Abstract] [Accepted Manuscript] [Supplement]  

Eun-Hyoung PARK, Zhouyan FENG, and Dominique M. DURAND

Diffusive coupling and network periodicity: a computational study
Biophys. J. BioFAST: April 25, 2008. doi:10.1529/biophysj.108.129239 [Abstract] [Accepted Manuscript]  

Nikolai Smolin, Bin Li, David Beck, and Valerie Daggett

Side-chain dynamics are critical for water permeation through aquaporin-1
Biophys. J. BioFAST: April 25, 2008. doi:10.1529/biophysj.107.125187 [Abstract] [Accepted Manuscript]  

Kim Montgomery

Multifrequency Forcing of a Hopf Oscillator Model of the Inner Ear
Biophys. J. BioFAST: April 18, 2008. doi:10.1529/biophysj.107.118604 [Abstract] [Accepted Manuscript]  

Thomas C Bishop

Geometry of the Nucleosomal DNA Superhelix
Biophys. J. BioFAST: April 18, 2008. doi:10.1529/biophysj.107.122853 [Abstract] [Accepted Manuscript]  

Kyle C. Smith and James C. Weaver

Active mechanisms are needed to describe cell responses to submicrosecond, megavolt-per-meter pulses
Biophys. J. BioFAST: April 11, 2008. doi:10.1529/biophysj.107.121921 [Abstract] [Accepted Manuscript]  

Frank J Brooks and Anders E Carlsson

Actin Polymerization Overshoots and Hydrolysis as Assayed by Pyrene Fluorescence
Biophys. J. BioFAST: April 4, 2008. doi:10.1529/biophysj.107.123125 [Abstract] [Accepted Manuscript]  

Ranjan Mukhopadhyay, Kerwyn Casey Huang, and Ned S. Wingreen

Lipid localization in bacterial cells through curvature-mediated microphase separation
Biophys. J. BioFAST: April 4, 2008. doi:10.1529/biophysj.107.126920 [Abstract] [Accepted Manuscript]  

Hiroyuki Okano, Tetsuya J. Kobayashi, Hirokazu Tozaki, and Hidenori Kimura

Estimation of the source-by-source effect of autorepression on genetic noise
Biophys. J. BioFAST: April 4, 2008. doi:10.1529/biophysj.107.124677 [Abstract] [Accepted Manuscript] [Supplement] [Supplement]  

Hermioni Zouridis and Vassily Hatzimanikatis

Effects of codon distributions and tRNA competition on protein translation
Biophys. J. BioFAST: March 21, 2008. doi:10.1529/biophysj.107.126128 [Abstract] [Accepted Manuscript]  

Aman Mahajan, Daisuke Sato, Yohannes Shiferaw, Ali Baher, Lai-Hua Xie, Robert Peralta, Riccardo Olcese, Alan Garfinkel, Zhilin Qu, and James Weiss

MODIFYING L-TYPE CALCIUM CURRENT KINETICS: CONSEQUENCES FOR CARDIAC EXCITATION AND ARRHYTHMIA DYNAMICS
Biophys. J. BioFAST: October 26, 2007. doi:10.1529/biophysj.106.098590 [Abstract] [Accepted Manuscript]  

Aman Mahajan, Yohannes Shiferaw, Daisuke Sato, Ali Baher, Riccardo Olcese, Lai-Hua Xie, Ming-Jim Yang, Peng-Sheng Chen, Juan G Restrepo, Alain Karma, Alan Grafinkel, Zhilin Qu, and James Weiss

A RABBIT VENTRICULAR ACTION POTENTIAL MODEL REPLICATING CARDIAC DYNAMICS AT RAPID HEART RATES
Biophys. J. BioFAST: May 4, 2007. doi:10.1529/biophysj.106.098160 [Abstract] [Accepted Manuscript]  

Nigar Kantarci, Pemra Doruker, and Turkan Haliloglu

COOPERATIVE FLUCTUATIONS POINT TO THE DIMERIZATION INTERFACE OF P53 CORE DOMAIN
Biophys. J. BioFAST: April 21, 2006. doi:10.1529/biophysj.105.077800 [Abstract] [Accepted Manuscript]  

Senthil K Kandasamy and Ronald G Larson

Molecular Dynamics Study of the Lung Surfactant Peptide SP-B1-25 with DPPC monolayers : Insights into Interactions and Peptide Position and Orientation
Biophys. J. BioFAST: December 13, 2004. doi:10.1529/biophysj.103.038430 [Abstract] [Accepted Manuscript]  

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Mark S Dillingham, Katherine L Tibbles, Jackie L Hunter, Jason C Bell, Stephen C. Kowalczykowski, and Martin R. Webb

A fluorescent single-stranded DNA binding protein as a probe for sensitive, real time assays of helicase activity
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.133512 [Abstract] [Accepted Manuscript]  

Mikhail A Karymov, Aleksey Bogdanov, and Yuri Lyubchenko

Single Molecule Fluorescence Analysis of Branch Migration of Holliday junctions. 1. Effect of DNA Sequence
Biophys. J. BioFAST: April 18, 2008. doi:10.1529/biophysj.107.127522 [Abstract] [Accepted Manuscript] [Supplement]  

Leila Shokri, Micah J McCauley, Ioulia Rouzina, and Mark C Williams

DNA overstretching in the presence of glyoxal: Structural evidence of force-induced DNA melting
Biophys. J. BioFAST: April 18, 2008. doi:10.1529/biophysj.108.132688 [Abstract] [Accepted Manuscript]  

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Fa-Qing Zhao, Raul Padron, and Roger Craig

Blebbistatin Stabilizes the Helical Order of Myosin Filaments by Promoting the Switch 2 Closed State
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.137067 [Abstract] [Accepted Manuscript]  

Natalia A Koubassova, Sergey Y Bershitsky, Michael A Ferenczi, and Andrey K Tsaturyan

Direct Modeling of X-Ray Diffraction Pattern from Contracting Skeletal Muscle
Biophys. J. BioFAST: June 6, 2008. doi:10.1529/biophysj.107.120832 [Abstract] [Accepted Manuscript]  

Mark Stuart Miller, Panagiotis Lekkas, Joan M Braddock, Gerrie P Farman, Bryan A Ballif, Thomas C Irving, David W Maughan, and Jim O Vigoreaux

Aging enhances indirect flight muscle fiber performance yet decreases flight ability in Drosophila
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.130005 [Abstract] [Accepted Manuscript]  

Appaji Panchangam, Dennis R. Claflin, Mark L. Palmer, and John A. Faulkner

Magnitude of sarcomere extension correlates with initial sarcomere length during lengthening of activated single fibers from soleus muscle of rats
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.107.118109 [Abstract] [Accepted Manuscript]  

John Jeremy Rice, Fei Wang, Donald M. Bers, and Pieter P. de Tombe

Approximate model of cooperative activation and crossbridge cycling in cardiac muscle using ordinary differential equations
Biophys. J. BioFAST: January 30, 2008. doi:10.1529/biophysj.107.119487 [Abstract] [Accepted Manuscript] [Supplement]  

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Chad E Miller, David D Busath, Bradley Strongin, and Jaroslaw Majewski

Integration of Ganglioside GT_1b Receptor into DPPE and DPPC Phospholipid Monolayers: An X-ray Reflectivity and Grazing Incidence Diffraction Study
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.107.128538 [Abstract] [Accepted Manuscript]  

Olga Cañadas, Ingnacio García-Verdugo, Kevin M.W. Keough, and Cristina Casals

SP-A permeabilizes lipopolysaccharide membranes by forming protein aggregates that extract lipids from the membrane
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.137323 [Abstract] [Accepted Manuscript]  

Sandra N Pinto, Liana C Silva, Rodrigo F. M. de Almeida, and Manuel Jose Prieto

Membrane domain formation, interdigitation and morphological alterations induced by the very long chain asymmetric C24:1 ceramide
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.108.129858 [Abstract] [Accepted Manuscript] [Supplement]  

Thomas Craighead Edrington, Michael Paul Bennett, and Arlene D Albert

Calorimetric Studies of Bovine Rod Outer Segment Disk Membranes Support a Monomeric Unit for Both Rhodopsin and Opsin
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.108.128868 [Abstract] [Accepted Manuscript]  

Qi Xu, Miyeon Kim, David Ho, Pawel Lachowicz, Gail Fanucci, and David Cafiso

Membrane Hydrocarbon Thickness Modulates the Dynamics of a Membrane Transport Protein
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.108.133629 [Abstract] [Accepted Manuscript]  

Gorazd Pucihar, Tadej Kotnik, Damijan Miklavic, and Justin Teissie

Kinetics of transmembrane transport of small molecules into electropermeabilized cells
Biophys. J. BioFAST: June 6, 2008. doi:10.1529/biophysj.108.135541 [Abstract] [Accepted Manuscript]  

Yi Y. Zuo, Seyed M. Tadayyon, Eleonora Keating, Lin Zhao, Ruud Veldhuizen, Nils O. Petersen, Matthias Walter Amrein, and Fred Possmayer

Atomic force microscopy studies of functional and dysfunctional pulmonary surfactant films. II. Albumin-inhibited pulmonary surfactant films and the effect of SP-A
Biophys. J. BioFAST: June 6, 2008. doi:10.1529/biophysj.108.130732 [Abstract] [Accepted Manuscript]  

Anton Arkhipov, Ying Yin, and Klaus Schulten

Four-scale description of membrane sculpting by BAR domains
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.132563 [Abstract] [Accepted Manuscript] [Supplement]  

Sébastien Buchoux, Joséphine Lai-Ke-Him, Marie Garnier, Pascale Tsan, Françoise Besson, Alain Brisson, and Erick J. Dufourc

SURFACTIN-TRIGGERED SMALL VESICLE FORMATION OF NEGATIVELY CHARGED MEMBRANES. A NOVEL MEMBRANE-LYSIS MECHANISM
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.107.128322 [Abstract] [Accepted Manuscript]  

Norbert Kucerka, Jason D. Perlmutter, Jianjun Pan, Stephanie Tristram-Nagle, John Katsaras, and Jonathan N. Sachs

The effect of cholesterol on short- and long-chain monounsaturated lipid bilayers as determined by molecular dynamics simulations and x-ray scattering
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.107.122465 [Abstract] [Accepted Manuscript] [Supplement]  

Karen Sabatini, Juha-Pekka Mattila, and Paavo K. Kinnunen

Interfacial Behavior of Cholesterol, Ergosterol, and Lanosterol in Mixtures with DPPC and DMPC
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.132076 [Abstract] [Accepted Manuscript]  

Yen Sun, Chang-Chun Lee, Wei-Chin Hung, Fang-Yu Chen, Ming-Tao Lee, and Huey W. Huang

The bound states of amphipathic drugs in lipid bilayers: study of curcumin
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.133736 [Abstract] [Accepted Manuscript]  

Felix Campelo, Harvey T McMahon, and Michael M Kozlov

The hydrophobic insertion mechanism of membrane curvature generation by proteins
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.133173 [Abstract] [Accepted Manuscript]  

Kévin CARVALHO, Laurence RAMOS, Christian ROY, and Catherine PICART

Giant unilamellar vesicles containing phosphatidylinositol(4,5)bisphosphate : characterization and functionality
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.107.126912 [Abstract] [Accepted Manuscript]  

Suliana Manley, Margaret Ruth Horton, Szymon Leszczynski, and Alice Petry Gast

Sorting of streptavidin protein coats on phase-separating model membranes
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.107.124024 [Abstract] [Accepted Manuscript]  

Azucena Gonzalez-Horta, David Andreu, Michael R. Morrow, and Jesus Perez-Gil

Effects of palmitoylation on dynamics and phospholipid-bilayer-perturbing properties of the N-terminal segment of pulmonary surfactant protein SP-C, as revealed by ²H-NMR
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.108.132845 [Abstract] [Accepted Manuscript]  

Norbert Kucerka, John F Nagle, Jonathan N Sachs, Scott Feller, Jeremy Pencer, Andrew J Jackson, and John Katsaras

Lipid bilayer structure determined by the simultaneous analysis of neutron and x-ray scattering data
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.108.132662 [Abstract] [Accepted Manuscript] [Supplement]  

Frédérick Jean-Marie de Meyer, Maddalena Venturoli, and Berend Smit

Molecular simulations of lipid mediated protein-protein interactions
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.107.124164 [Abstract] [Accepted Manuscript]  

Philip D Blood, Richard D. Swenson, and Gregory A. Voth

Factors Influencing Local Membrane Curvature Induction by N-BAR Domains as Revealed by Molecular Dynamics Simulations
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.107.121160 [Abstract] [Accepted Manuscript] [Supplement]  

Rainer A Böckmann, Bert L de Groot, Sergej Kakorin, Eberhard Neumann, and Helmut Grubmüller

Kinetics, Statistics, and Energetics of Lipid Membrane Electroporation Studied by Molecular Dynamics Simulations
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.108.129437 [Abstract] [Accepted Manuscript]  

Sónia Troeira Henriques, Leonard Keith Pattenden, Marie Isabel Aguilar, and Miguel A.R.B. Castanho

PrP(106-126) does not interact with membranes under physiological conditions
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.108.131458 [Abstract] [Accepted Manuscript]  

Kaoru Nomura, Takehiko Inaba, Kenichi Morigaki, Klaus Brandenburg, Ulrich Seydel, and Shoichi Kusumoto

Interaction of Lipopolysaccharide and Phospholipid in Mixed Membranes: Solid-State ³¹P-NMR Spectroscopic and Microscopic Investigations
Biophys. J. BioFAST: May 2, 2008. doi:10.1529/biophysj.108.131706 [Abstract] [Accepted Manuscript]  

Ilya Levental, Paul A. Janmey, and Andrejs Cebers

Electrostatic contribution to the surface pressure of charged monolayers containing polyphosphoinositides
Biophys. J. BioFAST: April 25, 2008. doi:10.1529/biophysj.107.126615 [Abstract] [Accepted Manuscript]  

Michael P Bennett and Drake C Mitchell

Regulation of membrane proteins by dietary lipids: Effects of cholesterol and DHA on rhodopsin stability and function
Biophys. J. BioFAST: April 18, 2008. doi:10.1529/biophysj.107.122788 [Abstract] [Accepted Manuscript]  

Andreas Hjarne Kunding, Michael Wrang Mortensen, Sune M Christensen, and Dimitrios Stamou

A Fluorescence-Based Technique to Construct Size Distributions from Single Object Measurements, Application to the Extrusion of Lipid Vesicles
Biophys. J. BioFAST: April 18, 2008. doi:10.1529/biophysj.108.128819 [Abstract] [Accepted Manuscript] [Supplement]  

Gora M'Baye, Yves Mély, Guy Duportail, and Andrey S Klymchenko

Liquid ordered and gel phases of lipid bilayers: fluorescent probes reveal close fluidity but different hydration
Biophys. J. BioFAST: April 4, 2008. doi:10.1529/biophysj.107.127480 [Abstract] [Accepted Manuscript]  

James Butler, Narla Mohandas, and Richard E Waugh

Integral protein linkage and the bilayer-skeletal separation energy in red blood cells
Biophys. J. BioFAST: April 4, 2008. doi:10.1529/biophysj.108.129163 [Abstract] [Accepted Manuscript]  

Gregory Holland and Todd M. Alam

Unique Backbone-Water Interaction Detected in Sphingomyelin Bilayers with ¹H/³¹P and ¹H/¹³C HETCOR MAS NMR Spectroscopy
Biophys. J. BioFAST: April 4, 2008. doi:10.1529/biophysj.108.130724 [Abstract] [Accepted Manuscript] [Supplement]  

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Chaouqi Misbah, Vitkova Victoria, Mader Maud-Alix, Polack Beno\^it Polack, and Podgorski Thomas

Micro-macro link in rheology of erythrocyte and vesicle suspensions
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.138826 [Abstract] [Accepted Manuscript]  

Willy Supatto, Scott E Fraser, and Julien Vermot

An All-Optical Approach for Probing Microscopic Flows in Living Embryos
Biophys. J. BioFAST: June 13, 2008. doi:10.1529/biophysj.108.137786 [Abstract] [Accepted Manuscript] [Supplement]  

Gernot Guigas and Matthias Weiss

Influence of hydrophobic mismatching on membrane protein diffusion
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.108.136069 [Abstract] [Accepted Manuscript]  

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Philippe Robert, Kheya Sengupta, Pierre-Henri Puech, Pierre Bongrand, and Laurent Limozin

Tuning the formation and rupture of single ligand-receptor bonds by hyaluronan-induced repulsion
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.135947 [Abstract] [Accepted Manuscript]  

Ilka B. Bischofs, Franziska Klein, Dirk Lehnert, Martin Bastmeyer, and Ulrich S. Schwarz

Filamentous Network Mechanics and Active Contractility Determine Cell and Tissue Shape
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.134296 [Abstract] [Accepted Manuscript]  

Björn Neu, Rosalinda Wenby, and Herbert J Meiselman

Effects of dextran molecular weight on red blood cell aggregation
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.108.130328 [Abstract] [Accepted Manuscript]  

Xiefan Lin and Brian P. Helmke

Micropatterned Structural Control Suppresses Mechanotaxis of Endothelial Cells
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.107.127761 [Abstract] [Accepted Manuscript]  

Jeffrey G. Jacot, Andrew D. McCulloch, and Jeffrey H. Omens

Substrate Stiffness Affects the Functional Maturation of Neonatal Rat Ventricular Myocytes
Biophys. J. BioFAST: June 27, 2008. doi:10.1529/biophysj.107.124545 [Abstract] [Accepted Manuscript]  

Yoichi Katsumoto, Yoshihito Hayashi, Ikuya Oshige, Shinji Omori, Noriyuki Kishii, Akio Yasuda, and Koji Asami

Dielectric Cytometry with Three-Dimensional Cellular Modeling
Biophys. J. BioFAST: June 20, 2008. doi:10.1529/biophysj.108.132019 [Abstract] [Accepted Manuscript]  

Mark A. Hallen, Jianghai Ho, Christine D. Yankel, and Sharyn A. Endow

Fluorescence Recovery Kinetic Analysis of -Tubulin Binding to the Mitotic Spindle
Biophys. J. BioFAST: June 20, 2008. doi:10.1529/biophysj.108.134593 [Abstract] [Accepted Manuscript] [Supplement]  

Aprotim Mazumder, T Roopa, Aakash Basu, L Mahadevan, and G.V. Shivashankar

Dynamics of chromatin decondensation reveals the structural integrity of a mechanically prestressed nucleus
Biophys. J. BioFAST: June 13, 2008. doi:10.1529/biophysj.108.132274 [Abstract] [Accepted Manuscript] [Supplement]  

Fang Jie, Tomoyo Sakata, Gerard Marriott, and Kuni H. Iwasa

Probing conformational changes of prestin with thiol-reactive optical switches
Biophys. J. BioFAST: June 13, 2008. doi:10.1529/biophysj.108.132878 [Abstract] [Accepted Manuscript]  

Simon Jungbauer, Huajian Gao, Joachim P. Spatz, and Ralf Kemkemer

Two Characteristic Regimes in Frequency Dependent Dynamic Reorientation of Fibroblasts on Cyclically Stretched Substrates
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.107.128611 [Abstract] [Accepted Manuscript] [Supplement]  

Jianwen Wendy Gu, Werner Hemmert, Dennis M Freeman, and Alexander J Aranyosi

Frequency-Dependent Shear Impedance Of The Tectorial Membrane
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.107.124727 [Abstract] [Accepted Manuscript] [Supplement]  

Urszula Golebiewska and Suzanne Scarlata

Gq Binds Two Effectors Separately in Cells: Evidence for Pre-determined Signaling Pathways
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.129353 [Abstract] [Accepted Manuscript]  

Nipa A. Mody and Michael R. King

Platelet Adhesive Dynamics II. High Shear-Induced Transient Aggregation via GPIb-vWF-GPIb Bridging
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.107.128520 [Abstract] [Accepted Manuscript]  

Nipa A. Mody and Michael R. King

Platelet Adhesive Dynamics I. Characterization of Platelet Hydrodynamic Collisions and Wall Effects
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.107.127670 [Abstract] [Accepted Manuscript]  

Daniel Sánchez, Nick Johnson, Chao Li, Pavel Novak, Johannes Rheinlaender, Yanjun Zhang, Uma Anand, Praveen Anand, Julia Gorelik, Gregory Frolenkov, Christopher Benham, Max Lab, Victor Ostanin, Tilman E Schäffer, David Klenerman, and Yuri Korchev

Non-contact measurement of the local mechanical properties of living cells using pressure applied via a pipette
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.129551 [Abstract] [Accepted Manuscript] [Supplement]  

Anna Tourovskaia, Nianzhen Li, and Albert Folch

Localized acetylcholine receptor clustering dynamics in response to microfluidic focal stimulation with agrin
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.107.128173 [Abstract] [Accepted Manuscript] [Supplement]  

Jianrong Wu and Keith M. Berland

Propagators and time-dependent diffusion coefficients for anomalous diffusion
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.107.121608 [Abstract] [Accepted Manuscript]  

Eleonora Savio-Galimberti, Joy Frank, Masashi Inoue, Joshua I. Goldhaber, Mark B. Cannell, John H. Bridge, and Frank B. Sachse

Novel features of the rabbit transverse tubular system revealed by quantitative analysis of three-dimensional reconstructions from confocal images
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.108.130617 [Abstract] [Accepted Manuscript] [Supplement]  

Christopher B. Wolf and Mohammad R. K. Mofrad

On the Octagonal Structure of the Nuclear Pore Complex: Insights from Coarse-Grained Models
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.108.130336 [Abstract] [Accepted Manuscript]  

Nurit Even-Tzur, Yoel Kloog, Michael Wolf, and David Elad

Mucus Secretion and Cytoskeletal Modifications in Cultured Nasal Epithelial Cells Exposed to Wall Shear Stresses
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.107.127142 [Abstract] [Accepted Manuscript]  

Ágnes Szabó, Gábor Horváth, János Szöllosi, and Peter Nagy

Quantitative characterization of the large-scale association of ErbB1 and ErbB2 by flow cytometric homo-FRET measurements
Biophys. J. BioFAST: May 16, 2008. doi:10.1529/biophysj.108.133371 [Abstract] [Accepted Manuscript]  

Godfrey L Smith and Niall MacQuaide

New and Notable for Ca²⁺-mobility in the sarcoplasmic reticulum of ventricular myocytes is low
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.108.133926 [Abstract] [Accepted Manuscript]  

Dan Siegal-Gaskins and Sean Crosson

Tightly-Regulated and Heritable Division Control in Single Bacterial Cells
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.108.128785 [Abstract] [Accepted Manuscript] [Supplement]  

Dmitry Terentyev, Zuzana Kubalova, Giorgia Valle, Alessandra Nori, Srikanth Vedamoorthyrao, Radmila Terentyeva, Serge Viatchenko-Karpinski, Donald M. Bers, Simon C. Williams, Pompeo Volpe, and Sandor Gyorke

Modulation of SR Ca Release by Luminal Ca and Calsequestrin in Cardiac Myocytes: Effects of CASQ2 Mutations Linked to Sudden Cardiac Death
Biophys. J. BioFAST: May 9, 2008. doi:10.1529/biophysj.107.128249 [Abstract] [Accepted Manuscript] [Supplement]  

Julia Schmitz, Benoit Martin, and Kay Eberhard Gottschalk

The Visocelasticity of Membrane Tethers and its Importance for Cell Adhesion
Biophys. J. BioFAST: May 2, 2008. doi:10.1529/biophysj.107.124289 [Abstract] [Accepted Manuscript]  

Michele D Savery and Edward R Damiano

The endothelial glycocalyx is hydrodynamically relevant in arterioles throughout the cardiac cycle
Biophys. J. BioFAST: April 25, 2008. doi:10.1529/biophysj.108.128975 [Abstract] [Accepted Manuscript] [Supplement]  

Philipp J Keller, Francesco Pampaloni, Gianluca Lattanzi, and Ernst HK Stelzer

Three-dimensional microtubule behaviour in Xenopus egg extracts reveals four dynamic states and state-dependent elastic properties
Biophys. J. BioFAST: April 25, 2008. doi:10.1529/biophysj.107.128223 [Abstract] [Accepted Manuscript] [Supplement]  

Seung E Lee, Surasak Chunsrivirot, Roger D. Kamm, and Mohammad R. K. Mofrad

Molecular Dynamics Study of Talin-Vinculin Binding
Biophys. J. BioFAST: April 11, 2008. doi:10.1529/biophysj.107.124487 [Abstract] [Accepted Manuscript] [Supplement]  

Aleksandr Rabodzey, Pilar Alcaide, Francis W Luscinskas, and Benoit Ladoux

Mechanical forces induced by the transendothelial migration of human neutrophils
Biophys. J. BioFAST: April 4, 2008. doi:10.1529/biophysj.107.119156 [Abstract] [Accepted Manuscript] [Supplement]  

Thomas E. Schaus and Gary G. Borisy

Performance of a population of independent filaments in lamellipodial protrusion
Biophys. J. BioFAST: April 4, 2008. doi:10.1529/biophysj.107.125005 [Abstract] [Accepted Manuscript]  

Marco Marenchino, Philip T F Williamson, Samuel Murri, Giorgia Zandomeneghi, Heidi Wunderli-Allenspach, Beat H Meier, and Stefanie D Krämer

Dynamics and Cleavability at the -Cleavage Site of APP(684-726) in Different Lipid Environments
Biophys. J. BioFAST: April 4, 2008. doi:10.1529/biophysj.108.129726 [Abstract] [Accepted Manuscript]  

Pawel Swietach, Kenneth W Spitzer, and Richard D Vaughan-Jones

Ca²⁺-mobility in the sarcoplasmic reticulum of ventricular myocytes is low
Biophys. J. BioFAST: April 4, 2008. doi:10.1529/biophysj.108.130385 [Abstract] [Accepted Manuscript] [Supplement]  

Khuloud Jaqaman, Jonas F Dorn, Gregory S Jelson, Jessica D Tytell, Peter K Sorger, and Gaudenz Danuser

Comparative Autoregressive Moving Average Analysis of Kinetochore Microtubule Dynamics in Yeast
Biophys. J. BioFAST: June 16, 2006. doi:10.1529/biophysj.105.080333 [Abstract] [Accepted Manuscript]  

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Dusan Lazar and Jiri Jablonsky

Response to Kinetic Models of Photosystem II should incorporate a Role for QB-nonreducing Reaction Centers
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.135566 [Abstract] [Accepted Manuscript]  

Wim J Vredenberg

Kinetic Models of Photosystem II should incorporate a Role for QB-nonreducing Reaction Centers
Biophys. J. BioFAST: July 3, 2008. doi:10.1529/biophysj.108.135426 [Abstract] [Accepted Manuscript]  

Sergei P Balashov, Eleonora S Imasheva, Jennifer M. Wang, and Janos K Lanyi

Excitation energy-transfer and the relative orientation of retinal and carotenoid in xanthorhodopsin
Biophys. J. BioFAST: May 30, 2008. doi:10.1529/biophysj.108.132175 [Abstract] [Accepted Manuscript]  

Fei Ma, Yukihiro Kimura, Xiao-Hui Zhao, Yi-Shi Wu, Peng Wang, Li-Min Fu, Zheng-Yu Wang, and Jian-Ping Zhang

Excitation Dynamics of Two Spectral Forms of the core complexes from Photosynthetic Bacterium Thermochromatium tepidum
Biophys. J. BioFAST: May 23, 2008. doi:10.1529/biophysj.108.133835 [Abstract] [Accepted Manuscript]