| Diffusion of the Second Messengers in the Cytoplasm Acts as a Variability Suppressor of the Single Photon Response in Vertebrate Phototransduction Biophysical Journal, Volume 94, Issue 9, 1 May 2008, Pages 3363-3383 Paolo Bisegna, Giovanni Caruso, Daniele Andreucci, Lixin Shen, Vsevolod V. Gurevich, Heidi E. Hamm and Emmanuele DiBenedetto Abstract The single photon response in vertebrate phototransduction is highly reproducible despite a number of random components of the activation cascade, including the random activation site, the random walk of an activated receptor, and its quenching in a random number of steps. Here we use a previously generated and tested spatiotemporal mathematical and computational model to identify possible mechanisms of variability reduction. The model permits one to separate the process into modules, and to analyze their impact separately. We show that the activation cascade is responsible for generation of variability, whereas diffusion of the second messengers is responsible for its suppression. Randomness of the activation site contributes at early times to the coefficient of variation of the photoresponse, whereas the Brownian path of a photoisomerized rhodopsin (Rh*) has a negligible effect. The major driver of variability is the turnoff mechanism of Rh*, which occurs essentially within the first 2–4 phosphorylated states of Rh*. Theoretically increasing the number of steps to quenching does not significantly decrease the corresponding coefficient of variation of the effector, in agreement with the biochemical limitations on the phosphorylated states of the receptor. Diffusion of the second messengers in the cytosol acts as a suppressor of the variability generated by the activation cascade. Calcium feedback has a negligible regulatory effect on the photocurrent variability. A comparative variability analysis has been conducted for the phototransduction in mouse and salamander, including a study of the effects of their anatomical differences such as incisures and photoreceptors geometry on variability generation and suppression. Abstract | Full Text | PDF (810 kb) |
| Coupling Field Theory with Continuum Mechanics: A Simulation of Domain Formation in Giant Unilamellar Vesicles Biophysical Journal, Volume 88, Issue 6, 1 June 2005, Pages 3855-3869 Gary S. Ayton, J. Liam McWhirter, Patrick McMurtry and Gregory A. Voth Abstract Domain formation is modeled on the surface of giant unilamellar vesicles using a Landau field theory model for phase coexistence coupled to elastic deformation mechanics (e.g., membrane curvature). Smooth particle applied mechanics, a form of smoothed particle continuum mechanics, is used to solve either the time-dependent Landau-Ginzburg or Cahn-Hilliard free-energy models for the composition dynamics. At the same time, the underlying elastic membrane is modeled using smooth particle applied mechanics, resulting in a unified computational scheme capable of treating the response of the composition fields to arbitrary deformations of the vesicle and vice versa. The results indicate that curvature coupling, along with the field theory model for composition free energy, gives domain formations that are correlated with surface defects on the vesicle. In the case that external deformations are included, the domain structures are seen to respond to such deformations. The present simulation capability provides a significant step forward toward the simulation of realistic cellular membrane processes. Abstract | Full Text | PDF (275 kb) |
| Heterogeneous Presynaptic Release Probabilities: Functional Relevance for Short-Term Plasticity Biophysical Journal, Volume 84, Issue 3, 1 March 2003, Pages 1563-1579 Julia Trommershäuser, Ralf Schneggenburger, Annette Zippelius and Erwin Neher Abstract We discuss a model of presynaptic vesicle dynamics, which allows for heterogeneity in release probability among vesicles. Specifically, we explore the possibility that synaptic activity is carried by two types of vesicles; first, a readily releasable pool and, second, a reluctantly releasable pool. The pools differ regarding their probability of release and time scales on which released vesicles are replaced by new ones. Vesicles of both pools increase their release probability during repetitive stimulation according to the buildup of Ca concentration in the terminal. These properties are modeled to fit data from the calyx of Held, a giant synapse in the auditory pathway. We demonstrate that this arrangement of two pools of releasable vesicles can account for a variety of experimentally observed patterns of synaptic depression and facilitation at this synapse. We conclude that synaptic transmission cannot be accurately described unless heterogeneity of synaptic release probability is taken into account. Abstract | Full Text | PDF (361 kb) |
Copyright © 2008 The Biophysical Society. All rights reserved.
Biophysical Journal, Volume 95, Issue 5, 2160-2171, 1 September 2008
doi:10.1529/biophysj.107.124909
Biophysical Theory and Modeling
Luigi Catacuzzeno
,
, Bernard Fioretti and Fabio Franciolini
Dipartimento di Biologia Cellulare e Ambientale, Università di Perugia, Perugia, Italy
Address reprint requests to Luigi Catacuzzeno, Dipartimento di Biologia Cellulare e Ambientale, Università di Perugia, via Pascoli 1, I-06123 Perugia, Italy.The entry of Ca2+ ions through voltage-gated Ca2+ channels is necessary for triggering vesicle fusion and neurotransmitter release 1,2. Electron microscopy studies of vertebrate synapses provide strong evidence for strict colocalization between synaptic vesicles and transmembrane particles, thought to be Ca2+ channels, with an estimated channel-vesicle distance of ∼10–30nm 3. Several studies point to a direct physical and functional interaction between voltage-gated Ca2+ channels and several vesicle-associated proteins implicated in neurotransmitter release 3,4,5. Because of the limited rate of diffusion of Ca2+ ions within the cytoplasm and small Ca2+ channel-vesicle distances, the Ca2+ concentration ([Ca]) at the sensor protein is thought to attain levels much higher than those present in the bulk. Due to the small spatial scale of these Ca2+ signals (Ca2+ microdomains), it has been impossible thus far to investigate their properties experimentally by direct Ca2+ imaging. Therefore, information regarding their shape and dynamics has remained elusive.
Theoretical modeling is thus the only viable approach for making inferences about the detailed properties of the Ca2+ microdomains and their linkage to neurotransmitter release. Computer simulations of Ca2+ microdomains, based essentially on Fick's law of diffusion, have demonstrated that at a few tens of nanometers from an open Ca2+ channel, where the sensor protein is supposedly located, the [Ca] reaches levels >100μM 6,7,8. In addition, the predicted [Ca] profiles show steep spatial gradients, such that within several hundred nanometers from the channel the enhanced [Ca] level has decreased to near bulk levels. Because of the steep Ca2+ microdomain gradients, these models predict that release of a docked vesicle would be mainly controlled by the colocalized Ca2+ channel, even in the presence of other Ca2+ channels located farther away from the vesicle 9,10.
Although some functional data, such as those derived from lower vertebrate synapses, essentially support these theoretical predictions 11,12,13, recent results on the mammalian calyx of Held and cortical synapses seem to suggest a different scenario 14,15. First, at the release Ca2+ sensor of the rat calyx of Held, a much smaller [Ca] (10–25μM) was found to be sufficient to achieve both the amount and the kinetics of the transmitter release under physiological conditions 1,16. Second, experiments aimed at evaluating the sensitivity of neurotransmitter release to Ca2+ channel blockers and fast Ca2+ buffers indicate that remote Ca2+ channels may also contribute to the fusion of a single vesicle, with some of them possibly being as far as 100nm from the release Ca2+ sensor 16,17. These recent observations cannot be reproduced by theoretical models that assume a strong colocalization between Ca2+ channels and release vesicles, as the structural evidence suggests 9. Alternatives include consideration of a less strict channel-vesicle colocalization at the Calyx of Held synapse in the rat 9. However, conclusions about Ca2+ channel-vesicle topography based on interpretation of available functional data strongly rely on the validity of the employed theoretical models of Ca2+ microdomains. These should take into account all the relevant physical processes or parameters necessary to give a correct prediction of the [Ca] profile near an open Ca2+ channel.
One potentially relevant factor that has not been incorporated into existing models of Ca2+ microdomains and neurotransmitter release is electrostatic force, which could markedly influence the distribution of Ca2+ ions within the cell. It is known that the inner leaflet of mammalian plasma membrane carries a significant negative charge due to the negatively charged phospholipid headgroups and amino acids of membrane proteins facing the cytoplasm 18,19. In addition recent studies suggest that phosphoinositides, carrying a substantial negative headgroup charge, concentrate at the presynaptic active zones 20,21, raising the possibility that the negative surface charge density at release sites may well be even higher than in other regions of the plasma membrane. It is also established that these negative charges generate a negative electrostatic potential that persists for several nanometers within the electrolytic solution bathing the membrane. This negative potential will attract cations and repel anions, and will have an impact on the distribution of ions in the immediate vicinity.
In this article, we explore a possible role of membrane surface charges in shaping the Ca2+ microdomain around an open Ca2+ channel. This has been achieved by using a computational model that calculates the ionic concentration profiles and the electrostatic potential near the membrane, in the presence of Ca2+ influx. We have also tested how the changes in the Ca2+ microdomain properties induced by membrane surface charges will reflect on the Ca2+-dependent neurotransmitter release. Our results indicate that surface charges make a tangible contribution toward shaping Ca2+ microdomains, thus changing the predicted neurotransmitter release.
Our model consists of a flat plasma membrane bathed by an electrolytic aqueous solution. The negative charges at the surface of the membrane, mainly due to phospholipid headgroups, are represented as a uniformly smeared negative surface charge density, σT, which in our calculations varies up to −0.1 C/m2, a value within the range experimentally determined for the inner leaflet of plasma membranes 19. Theoretical Poisson-Boltzmann calculations indicate that the approximation of discrete membrane charges with a uniformly smeared membrane charge has realistic consequences in the assessed profile of the electrostatic potential, at least for physiologically relevant membrane phospholipid compositions 22. The plasma membrane also contains one or more Ca2+ channels through which Ca2+ ions can enter the electrolytic solution at a rate that depends on the unitary Ca2+ current, iCa. The solution in contact with the membrane contains K+, Ca2+, Mg2+, and Cl− ions in addition to a mobile buffer, B2−, that binds Ca2+ ions in accordance with the following 1:1 reaction scheme
![]() | (Scheme 1) |
![]() | (1) |
The concentration profiles near the membrane are calculated by solving the flux conservative equation, applied to each ion present in the electrolytic solution. We considered the steady-state form of the flux conservative equation, which for ion j reads
![]() | (2) |
![]() | (3) |
according to Fick's first law of diffusion. The second term accounts for the drift velocity of a charged particle, induced by the electric field −
The term Fj in Eq. (2) accounts for changes in particle concentration due to chemical reactions. In our model, the only chemical reaction considered is the binding of Ca2+ to the mobile Ca2+ buffer ((Scheme 1)). Accordingly, Fj=k1 [Ca] [B] −k−1 [CaB] when j represents either Ca2+ or B2− and Fj=k−1 [CaB] −k1 [Ca] [B] when j represents CaB. For the other species present in solution, Fj=0.
In our model, most of the particles residing in the electrolytic solution possess a charge. Their concentration profiles will thus be also determined by the electrostatic potential, V, according to Eq. (3). The value of V is determined by considering all the charges present in the system, including the charged particle in the electrolytic solution and the surface charge on the membrane, by solving the following Poisson equation
![]() | (4) |
![]() | (5) |
is the gradient normal to the membrane surface.It is well known that monovalent and divalent cations present in the solution can bind to negatively charged phospholipids, reducing the effective surface charge density, σ. The term “binding” is here used to describe interactions between ions and phospholipids that exceed those made through the mean electrostatic field. Following the work of McLaughlin et al. 18, we assume that K+ ions bind to the negatively charged phospholipids P− according to the scheme
![]() | (Scheme 2) |
![]() | (Scheme 3) |
![]() | (6) |
The system to be solved consists of coupled partial differential equations, namely, the flux conservative equation for each mobile species (Eq. (2)) and the Poisson equation of electrostatics (Eq. (4)). Individually, each of these equations was solved using a finite-difference approach, and implementing the successive over-relaxation method described in Press et al. 25. The solution of the overall system was found by applying the following iterative scheme, similar to that applied for the solution of the same set of equations in calculations of ion channel permeation (PNP theory 26).
We found that this iterative scheme was stable provided that the Poisson equation solved at each iteration was modified as 28
![]() | (7) |
For each condition tested, we first solved the ion concentration profiles and electrostatic potential in the absence of Ca2+ influx. Due to the symmetry of the system in all directions parallel to the membrane, this solution was found by applying the iterative scheme described above to one-dimensional versions of Eqs. (2), which describe the spatial profiles of the variables along the z-direction, normal to the membrane. To find this solution, the following boundary conditions were used: for the flux conservative equation, f at z=0 (at the membrane) was settled to zero (reflective boundary condition), whereas at the other extreme (very far from the membrane), the ion concentrations were fixed to their given bulk values. In the Poisson equation, at z=0, dV/dz=−σ/ɛɛ0, and at z=L, V=0. The concentration and potential profiles found under these equilibrium conditions were then used as starting values for the subsequent two- or three-dimensional computations made in the presence of Ca2+ influx. In this case, the following boundary conditions were used: for the flux conservative equation, fj=0 at z=0 everywhere and for all ion species. At the Ca2+ channel location, fCa=−iCa/(zCaFA), where A is the area of the membrane facing the computational box containing the channel. At the other boundaries, ion concentrations were fixed to their equilibrium values, as determined from the previous one-dimensional computation. For the Poisson equation, dV/dz=−σ/ɛɛ0 at the membrane, whereas at the other boundaries, V was fixed to the equilibrium value, found in the one-dimensional computation.
Depending on the number of Ca2+ channels present in the membrane, we used either two- or three-dimensional versions of Eqs. (2). In the presence of only one open Ca2+ channel, the system has cylindrical symmetry, allowing its solution on a two-dimensional grid, including a z direction normal to the membrane and an r direction parallel to the membrane, and expressing the distance from the Ca2+ channel. The minimum grid-element size had a width (Δr) of 0.01nm and a height (Δz) of 0.01nm, with its origin centered at the channel site. The dimensions of each adjacent grid element were increased by increasing Δr by 20% in the r direction, and Δz by 20% in the z direction. The computational box had a total dimension of 1.36μm in both the z and r directions, and was composed of a total of 56×56 grid elements. We verified that reducing the size of the computational grids and assuming constantly spaced elements did not appreciably change the solution.
In the presence of more than one Ca2+ channel, the system loses its cylindrical symmetry. Therefore, in this case, we used a three-dimensional version of Eqs. (2), solved along the x and y directions parallel to the membrane, and the z direction normal to the membrane. The dimensions of the grid elements were settled in the following way. Δz had the same values used in the two-dimensional computations, whereas the values of Δx and Δy had values of 256, 128, 64, 32, 16, 8, 4, 2, 1, 2, 4, 8, 4, 2, 1, 2, 4, 8, 4, 2, 1, 2, 4, 8, 16, 32, 64, 128, and 256nm. The computational box had a total dimension of 1.031μm in both the x and y directions, and 1.36μm in the z direction, and was composed of a total of 14,297 grid elements. The six Ca2+ channels were placed in correspondence with the grid elements having Δx=Δy=1nm in contact with the membrane.
To check the accuracy of the code, we tested our output against several limiting cases for which analytical solutions exist. We first tested the Poisson equation and the flux conservative equation of our two-dimensional code separately. The Poisson equation was tested by considering a system containing no ions in solution and a flat charged membrane at z=0, by imposing V=0 at the computational grids farther from the membrane. For this system, the analytical solution for the electrostatic potential profile is
![]() | (8) |
The two-dimensional flux conservative equation was tested by computing the [Ca] profile in the presence of an open Ca2+ channel, in the absence of Ca2+ buffers, and not considering electrostatics. The analytical solution of this system is
![]() | (9) |
![]() | (10) |
![]() |
Figure 1B shows that in this case also our code gives results essentially identical to those obtained with Eq. (10).
We finally tested our iterative scheme, including the solution of both the flux conservative and Poisson equations, by considering a system that includes a charged surface bathed by a 1:1 electrolyte in the absence of Ca2+ influx. The analytical solution of this system, derived by Gouy and Chapman (reviewed by McLaughlin 29), is
![]() | (11) |
and
with ion concentrations related to the electrostatic potential by the Boltzmann equation![]() | (12) |
Finally, we checked the three-dimensional version of our iteration scheme by comparing its solution, obtained with only one open Ca2+ channel, with that obtained with the two-dimensional iteration scheme (data not shown).
A large variety of Ca2+-triggered release models have been assessed experimentally and employed in modeling studies. Here we use a release model derived from Ca2+ uncaging experiments at the rat calyx of Held synapse 15, including five independent Ca2+ binding sites
![]() | (Scheme 4) |
![]() | (13) |
![]() |
Cm=1μF/cm2, gNa=120 mS/cm2, gK=36 mS/cm2, gLeak=0.3 mS/cm2, VNa=50mV, VK=−77mV, and VLeak=−54mV. An action potential was induced by an applied current, Iapp=30μA/cm2, of 1-ms duration.In our model vesicle fusion is triggered by one Ca2+ channel, described by the following two-state kinetic scheme 31,32
![]() |
Table 1 gives descriptions and numerical values for the parameters used in this study. The parameters K1, K2, and K3, describing the equilibrium constants for ion binding to phospholipid membranes, were taken from studies assessing ion binding affinity to phosphatidylserine-containing membranes 18,24. As in Shahrezaei and Delaney 33, we considered an endogenous buffer with a rather high affinity, fast kinetics, and slow diffusion 34. We used 0.5mM of this buffer, equivalent to a buffer capacity of 250. Total surface charge density (σT) was considered a variable parameter whose numerical values ranged between 0 and 0.1 C/m2, in accordance with the surface charge densities found for the inner leaflet of mammalian plasma membrane 19. Finally, we considered a Ca2+ current of 0.2 pA and a Ca2+ diffusion coefficient of 220μm2/s. The sensitivity of the output of the model to variations of the main parameters is presented in Supplementary Material, Data S1 .
| Table 1 Summary of parameters used |
| Description | Value | ||
|---|---|---|---|
| Equilibrium constant for K+ binding to negatively charged phospholipids | K1=0.15M−1 | ||
| Equilibrium constant for Ca2+ binding to negatively charged phospholipids | K2=12.0M−1 | ||
| Equilibrium constant for Mg2+ binding to negatively charged phospholipids | K3=6.0M−1 | ||
| Bulk KCl concentration | [KCl]=0.14M | ||
| Bulk CaCl2 concentration | [CaCl2]=1e-7M | ||
| Bulk MgCl2 concentration | [MgCl2]=0.5e–3M | ||
| Total Ca2+ buffer concentration | [BT]=0.5e–3M | ||
| Ca2+ association constant of the buffer | k1=3e8M−1 s−1 | ||
| Ca2+ dissociation constant of the buffer | k-1=600.0s−1 | ||
| Total membrane charge density | σT=0.0 to −0.1 C/m2 | ||
| Ca2+ current throught the Ca2+ channel | iCa=0 to −0.2 pA | ||
| Valence of free buffer | zB=−2.0 | ||
| Valence of Ca2+-bound buffer | zBCa=0.0 | ||
| Ca2+ ions diffusion coefficient | DCa=220μm2/s | ||
| Ca2+ buffer diffusion coefficient | DB=DBca=27.5μm2/s | ||
Fig. 2 shows results obtained from simulations taken in the absence of Ca2+ influx and with a membrane surface charge density of −0.05 C/m2, a value comparable to those found for the inner leaflet of mammalian plasma membranes 19,29. The negative charge localized at the surface of the membrane generates a negative electrostatic potential that decays to near zero within a few nanometers from the membrane (Figure 2A). As shown in Figure 2B, this negative electrostatic potential causes an increase in the [Ca] near the membrane, according to the Boltzmann relationship valid under equilibrium conditions:
![]() | (14) |
Fig. 3 compares simulations of Ca2+ microdomains obtained in the presence of an open Ca2+ channel, when the membrane has no surface charge, and with a membrane carrying a surface charge of −0.05 C/m2 and −0.1 C/m2. Figure 3A shows the [Ca] profiles along the z axis (normal to the membrane) at a radial distance of r=0 (in front of the channel), and Figure 3BD, shows the [Ca] profiles along the r axis (parallel to the membrane) at distances of 0.1, 1, and 10nm from the membrane. It is evident that inclusion of a negative surface charge significantly changes the [Ca] profiles. Very close to the membrane (z=0.1nm), the [Ca] ismuch higher in the presence of negative surface charges (Figure 3B) due to the strong attraction exerted by the negative electrostatic potential at these locations (Figure 3Binset). Farther from the membrane, at z=1nm, the [Ca] in the presence of surface charge is still higher for relatively high radial distances from the channel (Figure 3C), in accordance with the existence of a still significantly negative electrostatic potential (Figure 3C, inset). However, at smaller distances from the Ca2+ channel, the [Ca] estimated in the presence of surface charge is smaller than in the absence of surface charge. This result suggests that besides an obvious attractive tendency on Ca2+ ions, surface charges exert an additional action that tends to reduce Ca2+ accumulation near the point of Ca2+ influx. This effect is even more evident by looking at the [Ca] profiles obtained at 10nm from the membrane, where the electrostatic potential is decayed close to zero (Figure 3D, inset). In this case, the [Ca] in the presence of surface charge is lower than the [Ca] obtained without surface charge for radial distances from the channel <∼40nm. For higher radial distances, surface charges have only minor effects on the [Ca] (Figure 3D).
A possible explanation for the observed reduction in the [Ca] at small radial distances from the channel could be that a preferential surface diffusion of positively charged ions along the plane of the membrane is promoted by the negative surface charge 35,36. Surface charges would indeed favor Ca2+ ions spreading out very efficiently along the lateral direction while allowing a much slower redistribution intothe third dimension normal to the membrane. To verify this hypothesis, we looked at the effects of surface charges on the electrodiffusive fluxes in both the lateral and normal directions. As shown in Fig. 4, the presence of surface charges markedly increases the lateral flux (estimated at the computational boxes in contact with the membrane) while producing a significant decrease of the electrodiffusive flux along the direction normal to the membrane (estimated for the computational boxes right in front of the channel). These results suggest that in the presence of surface charge, Ca2+ ions preferentially travel along the lateral direction and very close to the membrane, thus reducing their accumulation at points more distant from the membrane.
To better understand the effects of surface charges on the spatial profile of the Ca2+ microdomain, in Fig. 5 we plotted the [Ca] profiles of Fig. 3, normalized to the [Ca] present at 0.1nm from the point of Ca2+ influx. These plots suggest that a relevant effect of negative surface charges is to decrease the steepness of the Ca2+ microdomain decay in the r direction, with the result that the [Ca] remains elevated for longer distances from the point of Ca2+ influx (Figure 5BD). By contrast, surface charges cause an increase in the steepness in the z direction, normal to the membrane (Figure 5A). The changes in the shape of Ca2+ microdomains due to the presence of a surface charge can also be appreciated by the isoconcentration profiles shown in Figure 5EF. It is evident that the Ca2+ microdomain, symmetrically distributed along the r and z directions in the absence of surface charges, flattens out in the presence of negative surface charges.
An interesting consequence of the reduced steepness of [Ca] profiles along the direction parallel to the membrane is an increased overlap of Ca2+ microdomains originating from distinct Ca2+ channels. This is better appreciated in the three-dimensional simulations shown in Fig. 6, where we consider six Ca2+ channels (1–6) located 21nm from each other (Figure 6A), and compare the [Ca] profiles near channel 1 when all six channels are open and when channels 2–6 are turned off (Figure 6B). This allows us to assess the contribution of neighbor channels to the Ca2+ microdomain established by channel 1 (Figure 6C). As shown in Figure 6BC, the contribution of channels 2–6 to the total [Ca] close to channel 1 is significantly increased when a negative surface charge is introduced, indicating an increased Ca2+ microdomain overlap.
Experimental estimates of submembrane [Ca] near a point of Ca2+ influx is usually performed by the so-called reverse approach 14,15,37. Specifically, the activity of Ca2+-dependent proteins placed in close proximity to the site of Ca2+ entry, such as Ca2+-activated K+ channels or the Ca2+ sensor of the release machinery, is first evaluated in the absence of Ca2+ influx, by applying different [Ca]bulks under equilibrium conditions. In the presence of Ca2+ influx, the [Ca] reached at the sensor protein is then assumed to be equal to the [Ca]bulk that under equilibrium conditions (no Ca2+ influx) would give the same degree of sensor protein activation, a quantity we here call apparent [Ca] at the sensor protein, [Ca]SP*. Obviously, because of the Ca2+ accumulation near a negatively charged membrane, for a sensor protein located very close to the membrane (where the electrostatic potential is still significantly negative (cf. Fig. 2)) the [Ca]bulk needed to attain a given protein activity (i.e., the [Ca]SP*) will be lower than the actual [Ca] in contact with the sensor protein. It follows that the appropriate output of our model to be compared with experimental data deriving from the reverse approach is the Ca2+ microdomain profile given in terms of the [Ca]SP*. The converted Ca2+ microdomain profiles, assessed from [Ca] versus [Ca]bulk relationships similar to those shown in Figure 2C, are shown in Fig. 7. These profiles indicate that the [Ca]SP* in the presence of asurface charge is significantly smaller than the [Ca]SP* in the absence of a surface charge (obviously, in the absence of surface charge, [Ca]=[Ca]SP*) for small distances from the channel, in both the r and z directions. At distances farther from the Ca2+ channel, no substantial differences are observed in the [Ca]SP* profiles of the two models. These results indicate that membrane surface charges tend to reduce the estimated [Ca] at the sensor protein, provided that a strong Ca2+ channel-vesicle colocalization exists.
The results shown above suggest that the presence of a surface charge at the inner leaflet of the membrane may have a significant effect on the vesicle release probability. To verify this notion, we used a Ca2+-dependent release model, derived from experiments carried out on the calyx of Held 15, and looked at the effects of varying the membrane surface charge on the release probability. In these simulations, we assumed that the fusion of the vesicle is gated by only one Ca2+ channel placed at a radial distance of either 10 or 40nm from the vesicle Ca2+ sensor. In the model, vesicle fusion is evoked by an action-potential-like voltage waveform that controls the gating of a two-state voltage-gated Ca2+ channel 31. Since the Ca2+ affinity of the release model we used (as for any other existing release model) was derived experimentally in terms of the [Ca]bulk under equilibrium conditions, it represents an apparent Ca2+ affinity, which, in the presence of surface charges and with the Ca2+ sensor located within the electrical double layer, may differ significantly from the true value. To overcome this problem, in our simulations we changed the Ca2+ binding rate constant of the model (kon) to obtain an action-potential-induced release probability under control conditions of ∼0.2, a value similar to that estimated at the rat calyx of Held synapse 9. As shown in Fig. 8, we found that the effect of changing the surface charge density on the predicted neurotransmitter release varies depending on the position of the Ca2+ sensor relative to the membrane. When the Ca2+ sensor is placed very close to the membrane (i.e., within the electrical double layer), the evoked release probability increases with charge density. This is due to the increase of the [Ca] at these locations, promoted by the electrostatic attraction of Ca2+ ionsby the negative surface charge (cf. Fig. 3). By contrast, an inverse relationship between the surface charge density and the evoked neurotransmitter release is obtained when the Ca2+ sensor is located farther from the membrane (Figure 8D). As shown in Figure 3 and Figure 4, this is due to a reduction of the [Ca] at these locations caused by an increased lateral diffusion of Ca2+ ions promoted by the surface charges.
In this study, we looked at the effects of negative membrane surface charges on the properties of the Ca2+ microdomains that build up around open Ca2+ channels. We found that membrane surface charges, present at densities comparable to those found in the inner leaflet of plasma membranes, substantially modify the height and shape of the Ca2+ microdomain. Specifically, besides an expected attractive tendency on Ca2+ ions that results in an increased [Ca] very close to the membrane, surface charges exert an additional action that tends to reduce Ca2+ build-up around open Ca2+ channels. This causes a reduction in the [Ca] close to the point of Ca2+ influx, an effect that is particularly evident at distances from the membrane >1nm, where the electrostatic potential is low.
A possible explanation for this somehow unexpected result is that the negative surface charge facilitates lateral diffusion of the charged ions 35,36 (cf. Fig. 4)). Ca2+ ions, attracted by the negative surface charges, raise the electrostatic potential in the vicinity of the channel, thus generating an electrical gradient that in turn increases the diffusion of Ca2+ ions in the lateral direction. In this way, surface charges would enable a thin film of concentrated Ca2+ to spread out very efficiently along the two dimensions of the surface membrane, rather than moving away from the membrane. Under this interpretation, electrostatics drastically change the properties of Ca2+ diffusion away from the Ca2+ channel, and clearly distinguish two distinct steps: a rapid lateral spread along the negative surface potential, and a slower redistribution of the spread Ca2+ into the third dimension, normal to the membrane.
Our model also shows that negative surface charges tend to decrease the spatial steepness of the Ca2+ microdomain, resulting in an increased overlap of microdomains originating from different Ca2+ channels. This result suggests a greater contribution of distant Ca2+ channels to the release of a vesicle located very close to a point of Ca2+ influx. This could have particular relevance at synapses where vesicular release is controlled by multiple Ca2+ channels, such as hippocampal and cerebellar synapses 17,38,39.
Another finding of this study is that surface charges reduce the [Ca] estimated at the release Ca2+ sensor by a reverse approach, provided that a strong channel-vesicle colocalization exists. This revisitation would, for instance, make the estimated [Ca] at the Ca2+ sensor of the calyx of Held synapse (10–25μM, which is significantly lower than the previous theoretical predictions of 75–300μM at few tens of nanometer from a Ca2+ channel 7,8) in principle not in contrast with a strong channel-vesicle colocalization.
We have also found that changing the surface charge density will have opposite effects on the action-potential-evoked neurotransmitter release, depending on the distance of the Ca2+ sensor of the release machinery from the membrane. Specifically, if the Ca2+ sensor lies within the electrical double layer, the release probability increases with the negative surface charge density. This is caused by the electrostatic attraction of Ca2+ ions by the negative surface charges, which results in an increase of the [Ca] at these locations. By contrast, if the Ca2+ sensor is located at farther distances from the membrane, an increase of the negative surface charge density causes a decrease of the release probability. As we have seen, this is due to the preferential lateral diffusion of Ca2+ ions promoted by the surface charge, which results in a decrease of the [Ca] at locations relatively far from the membrane. Since experimental strategies to change the surface charge density are known 40, this theoretical prediction could be used to determine the distance of the Ca2+ sensor from the membrane in real synapses.
Experimental data on the properties of Ca2+ microdomains and neurotransmitter release are typically obtained from patched cells, using exogenous Ca2+ buffers such as EGTA and BAPTA, which are considered to give information on the degree of colocalization of the Ca sensor and the point of Ca influx 1. These two Ca2+ buffers have the same affinity for Ca ions, but BAPTA has a binding constant ∼100 times larger than that of EGTA, thus allowing the capture of Ca2+ ions in a very short time after their entry into the cytosol, and in this way reducing the [Ca] at points relatively close (<10nm) to the Ca source. This kinetic difference between BAPTA and EGTA is due to the different protonation states of their Ca2+ binding moieties at physiological pH, with EGTA almost totally protonated, whereas BAPTA shows a much lower pKa. In this respect, negative surface charges are expected to electrostatically attract protons close to the membrane, thus increasing the degree of protonation of BAPTA molecules close to the point of Ca2+ influx, and reducing its Ca2+ binding rate constant to values closer to those of EGTA. This effect could in theory explain a numberof experimental data showing that the Ca2+ buffering capability of BAPTA, when compared to that observed for EGTA, is not as high as expected 17,41,42,43.
The predictions of our model suggest that changes in surface charge density could be instrumental in producing a form of activity-dependent change in release probability. Specifically, it is well known that aminophospholipid translocases, the enzymes that regulate the negatively charged phospholipid composition of the two sides of the plasma membrane, have an activity strongly regulated by the [Ca]i44, such that a significant decrease of negatively charged phosphatidylserine present in the inner leaflet of plasma membrane can be observed after an increase in the [Ca]i45. It is possible that changes in surface charge density are thus used to modulate neurotransmitter release in response to a strong Ca2+ influx promoted by high-frequency neuronal stimulation.
We are aware that this model, based on a continuum approach that greatly simplifies the numerical calculus, has limitations. First, our model considers a homogeneous smeared surface charge density and a mean field approach for Ca ion diffusion. Although theoretical Poisson-Boltzmann calculations have shown that this approximation is realistic for physiologically relevant phospholipid compositions 22, at the smallest distance from the membrane considered in this article (0.1nm), the mean field assumption could give results significantly different from the real case of discrete membrane negative charges. A more realistic view should include only a few Ca ions and discrete plasma membrane charges interacting with and influencing the diffusive movement. Second, a more realistic synaptic geometry should include membrane-associated synaptic vesicles, already shown to sensibly modify Ca2+ diffusion near open Ca2+ channels 33,46, as well as their cytoplasmic surface charge. It should in addition consider the narrow escape problem 47 resulting from the confined space between the plasma membrane and the vesicle. All these limitations call for a more appropriate approach, such as that provided by Monte Carlo simulations.
We wish to thank Wolfgang Nonner (University of Miami) and Sandy Harper (University of Dundee) for useful comments on the manuscript.
This work was supported by grants from Fondazione Cassa di Risparmio di Perugia, Perugia, Italy.
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