BIOPHYSICAL LETTERS:

Anahita Tafvizi, Fang Huang, Jason S. Leith, Alan R. Fersht, Leonid A. Mirny, and Antoine M. van Oijen

Tumor Suppressor p53 Slides on DNA with Low Friction and High Stability
Biophys. J. 2008 95: L01-L03; Published ahead of print on April 18, 2008 as doi:10.1529/biophysj.108.134122. [Abstract] [Full Text] [PDF] [Supplement]  

Alrun N. Koller, Harald Schwalbe, and Holger Gohlke

Starting Structure Dependence of NMR Order Parameters Derived from MD Simulations: Implications for Judging Force-Field Quality
Biophys. J. 2008 95: L04-L06; Published ahead of print on April 25, 2008 as doi:10.1529/biophysj.108.132811. [Abstract] [Full Text] [PDF] [Supplement]  

Robert B. Best, Nicolae-Viorel Buchete, and Gerhard Hummer

Are Current Molecular Dynamics Force Fields too Helical?
Biophys. J. 2008 95: L07-L09; Published ahead of print on May 2, 2008 as doi:10.1529/biophysj.108.132696. [Abstract] [Full Text] [PDF] [Supplement]  

Mohamed Y. El-Naggar, Yuri A. Gorby, Wei Xia, and Kenneth H. Nealson

The Molecular Density of States in Bacterial Nanowires
Biophys. J. 2008 95: L10-L12; Published ahead of print on April 25, 2008 as doi:10.1529/biophysj.108.134411. [Abstract] [Full Text] [PDF] [Supplement]  

MINI-REVIEW:

Maksymilian Chruszcz, Alexander Wlodawer, and Wladek Minor

Determination of Protein Structures—A Series of Fortunate Events
Biophys. J. 2008 95: 1-9; Published ahead of print on April 25, 2008 as doi:10.1529/biophysj.108.131789. [Abstract] [Full Text] [PDF] [Supplement]  

Hong Qian

Cooperativity and Specificity in Enzyme Kinetics: A Single-Molecule Time-Based Perspective
Biophys. J. 2008 95: 10-17; Published ahead of print on April 25, 2008 as doi:10.1529/biophysj.108.131771. [Abstract] [Full Text] [PDF] [Supplement]  

BIOPHYSICAL THEORY AND MODELING:

F. Calvo and P. Dugourd

Folding of Gas-Phase Polyalanines in a Static Electric Field: Alignment, Deformations, and Polarization Effects
Biophys. J. 2008 95: 18-32; Published ahead of print on January 25, 2008 as doi:10.1529/biophysj.107.124685. [Abstract] [Full Text] [PDF]  

Pieter J. in 't Veld and Mark J. Stevens

Simulation of the Mechanical Strength of a Single Collagen Molecule
Biophys. J. 2008 95: 33-39; Published ahead of print on March 21, 2008 as doi:10.1529/biophysj.107.120659. [Abstract] [Full Text] [PDF]  

Andrew D. Trister and Daniel A. Hammer

Role of gp120 Trimerization on HIV Binding Elucidated with Brownian Adhesive Dynamics
Biophys. J. 2008 95: 40-53; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.118430. [Abstract] [Full Text] [PDF]  

Weiming Cao and Borries Demeler

Modeling Analytical Ultracentrifugation Experiments with an Adaptive Space-Time Finite Element Solution for Multicomponent Reacting Systems
Biophys. J. 2008 95: 54-65; Published ahead of print on April 4, 2008 as doi:10.1529/biophysj.107.123950. [Abstract] [Full Text] [PDF]  

Lorin S. Milescu, Tadashi Yamanishi, Krzysztof Ptak, Murtaza Z. Mogri, and Jeffrey C. Smith

Real-Time Kinetic Modeling of Voltage-Gated Ion Channels Using Dynamic Clamp
Biophys. J. 2008 95: 66-87; Published ahead of print on March 28, 2008 as doi:10.1529/biophysj.107.118190. [Abstract] [Full Text] [PDF] [Supplement]  

R. A. Faville, A. J. Pullan, K. M Sanders, and N. P. Smith

A Biophysically Based Mathematical Model of Unitary Potential Activity in Interstitial Cells of Cajal
Biophys. J. 2008 95: 88-104; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.122507. [Abstract] [Full Text] [PDF]  

Grzegorz Raszewski, Bruce A. Diner, Eberhard Schlodder, and Thomas Renger

Spectroscopic Properties of Reaction Center Pigments in Photosystem II Core Complexes: Revision of the Multimer Model
Biophys. J. 2008 95: 105-119; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.123935. [Abstract] [Full Text] [PDF] [Supplement]  

Jiankuai Diao and Emad Tajkhorshid

Indirect Role of Ca²⁺ in the Assembly of Extracellular Matrix Proteins
Biophys. J. 2008 95: 120-127; Published ahead of print on March 21, 2008 as doi:10.1529/biophysj.108.129106. [Abstract] [Full Text] [PDF]  

Panita Decha, Thanyada Rungrotmongkol, Pathumwadee Intharathep, Maturos Malaisree, Ornjira Aruksakunwong, Chittima Laohpongspaisan, Vudhichai Parasuk, Pornthep Sompornpisut, Somsak Pianwanit, Sirirat Kokpol, and Supot Hannongbua

Source of High Pathogenicity of an Avian Influenza Virus H5N1: Why H5 Is Better Cleaved by Furin
Biophys. J. 2008 95: 128-134; Published ahead of print on March 28, 2008 as doi:10.1529/biophysj.107.127456. [Abstract] [Full Text] [PDF]  

Jeffrey R. Groff and Gregory D. Smith

Ryanodine Receptor Allosteric Coupling and the Dynamics of Calcium Sparks
Biophys. J. 2008 95: 135-154; Published ahead of print on March 21, 2008 as doi:10.1529/biophysj.107.119982. [Abstract] [Full Text] [PDF]  

Ignacio Ramis-Conde, Dirk Drasdo, Alexander R. A. Anderson, and Mark A. J. Chaplain

Modeling the Influence of the E-Cadherin-β-Catenin Pathway in Cancer Cell Invasion: A Multiscale Approach
Biophys. J. 2008 95: 155-165; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.114678. [Abstract] [Full Text] [PDF]  

CHANNELS, RECEPTORS, AND ELECTRICAL SIGNALING:

Amitabha Chattopadhyay, Satinder S. Rawat, Denise V. Greathouse, Devaki A. Kelkar, and Roger E. Koeppe, II

Role of Tryptophan Residues in Gramicidin Channel Organization and Function
Biophys. J. 2008 95: 166-175; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.124206. [Abstract] [Full Text] [PDF]  

Steven Mennerick, Michael Lamberta, Hong-Jin Shu, Joshua Hogins, Cunde Wang, Douglas F. Covey, Lawrence N. Eisenman, and Charles F. Zorumski

Effects on Membrane Capacitance of Steroids with Antagonist Properties at GABA_A Receptors
Biophys. J. 2008 95: 176-185; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.124768. [Abstract] [Full Text] [PDF] [Supplement]  

MEMBRANES:

Timothy C. Anglin and John C. Conboy

Lateral Pressure Dependence of the Phospholipid Transmembrane Diffusion Rate in Planar-Supported Lipid Bilayers
Biophys. J. 2008 95: 186-193; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.118976. [Abstract] [Full Text] [PDF]  

Kathleen Wood, Ursula Lehnert, Brigitte Kessler, Giuseppe Zaccai, and Dieter Oesterhelt

Hydration Dependence of Active Core Fluctuations in Bacteriorhodopsin
Biophys. J. 2008 95: 194-202; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.120386. [Abstract] [Full Text] [PDF]  

Smita P. Soni, Daniel S. LoCascio, Yidong Liu, Justin A. Williams, Robert Bittman, William Stillwell, and Stephen R. Wassall

Docosahexaenoic Acid Enhances Segregation of Lipids between Raft and Nonraft Domains: ²H-NMR Study
Biophys. J. 2008 95: 203-214; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.123612. [Abstract] [Full Text] [PDF]  

Christian Code, Yegor Domanov, Arimatti Jutila, and Paavo K. J. Kinnunen

Amyloid-Type Fiber Formation in Control of Enzyme Action: Interfacial Activation of Phospholipase A₂
Biophys. J. 2008 95: 215-224; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.108.128710. [Abstract] [Full Text] [PDF] [Supplement]  

Manuela Zoonens, Yana K. Reshetnyak, and Donald M. Engelman

Bilayer Interactions of pHLIP, a Peptide that Can Deliver Drugs and Target Tumors
Biophys. J. 2008 95: 225-235; Published ahead of print on March 21, 2008 as doi:10.1529/biophysj.107.124156. [Abstract] [Full Text] [PDF]  

Aurelia R. Honerkamp-Smith, Pietro Cicuta, Marcus D. Collins, Sarah L. Veatch, Marcel den Nijs, M. Schick, and Sarah L. Keller

Line Tensions, Correlation Lengths, and Critical Exponents in Lipid Membranes Near Critical Points
Biophys. J. 2008 95: 236-246; Published ahead of print on April 18, 2008 as doi:10.1529/biophysj.107.128421. [Abstract] [Full Text] [PDF] [Supplement]  

MUSCLE AND CONTRACTILITY:

Yuri E. Nesmelov, Roman V. Agafonov, Adam R. Burr, Ralph T. Weber, and David D. Thomas

Structure and Dynamics of the Force-Generating Domain of Myosin Probed by Multifrequency Electron Paramagnetic Resonance
Biophys. J. 2008 95: 247-256; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.124305. [Abstract] [Full Text] [PDF]  

NUCLEIC ACIDS:

Kelly M. Knee, Surjit B. Dixit, Colin Echeverría Aitken, Sergei Ponomarev, D. L. Beveridge, and Ishita Mukerji

Spectroscopic and Molecular Dynamics Evidence for a Sequential Mechanism for the A-to-B Transition in DNA
Biophys. J. 2008 95: 257-272; Published ahead of print on March 7, 2008 as doi:10.1529/biophysj.107.117606. [Abstract] [Full Text] [PDF] [Supplement]  

Christian H. Reccius, Samuel M. Stavis, John T. Mannion, Larry P. Walker, and H. G. Craighead

Conformation, Length, and Speed Measurements of Electrodynamically Stretched DNA in Nanochannels
Biophys. J. 2008 95: 273-286; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.121020. [Abstract] [Full Text] [PDF]  

Kurt Andresen, Xiangyun Qiu, Suzette A. Pabit, Jessica S. Lamb, Hye Yoon Park, Lisa W. Kwok, and Lois Pollack

Mono- and Trivalent Ions around DNA: A Small-Angle Scattering Study of Competition and Interactions
Biophys. J. 2008 95: 287-295; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.123174. [Abstract] [Full Text] [PDF]  

Shozeb Haider, Gary N. Parkinson, and Stephen Neidle

Molecular Dynamics and Principal Components Analysis of Human Telomeric Quadruplex Multimers
Biophys. J. 2008 95: 296-311; Published ahead of print on March 28, 2008 as doi:10.1529/biophysj.107.120501. [Abstract] [Full Text] [PDF]  

PHOTOBIOPHYSICS:

K. C. Toh, Ivo H. M. van Stokkum, Johnny Hendriks, Maxime T. A. Alexandre, J. C. Arents, Marcela Avila Perez, Rienk van Grondelle, Klaas J. Hellingwerf, and John T. M. Kennis

On the Signaling Mechanism and the Absence of Photoreversibility in the AppA BLUF Domain
Biophys. J. 2008 95: 312-321; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.117788. [Abstract] [Full Text] [PDF] [Supplement]  

PROTEINS:

Eric S. Peterson, Emma F. Leonard, Jocelyn A. Foulke, Matthew C. Oliff, Rosanne D. Salisbury, and David Y. Kim

Folding Myoglobin within a Sol-Gel Glass: Protein Folding Constrained to a Small Volume
Biophys. J. 2008 95: 322-332; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.106.097428. [Abstract] [Full Text] [PDF]  

Natalya Pertaya, Christopher B. Marshall, Yeliz Celik, Peter L. Davies, and Ido Braslavsky

Direct Visualization of Spruce Budworm Antifreeze Protein Interacting with Ice Crystals: Basal Plane Affinity Confers Hyperactivity
Biophys. J. 2008 95: 333-341; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.125328. [Abstract] [Full Text] [PDF] [Supplement]  

SPECTROSCOPY, IMAGING, OTHER TECHNIQUES:

Kevin M. Bennett, Erik M. Shapiro, Christopher H. Sotak, and Alan P. Koretsky

Controlled Aggregation of Ferritin to Modulate MRI Relaxivity
Biophys. J. 2008 95: 342-351; Published ahead of print on March 7, 2008 as doi:10.1529/biophysj.107.116145. [Abstract] [Full Text] [PDF]  

Kambiz M. Hamadani and Shimon Weiss

Nonequilibrium Single Molecule Protein Folding in a Coaxial Mixer
Biophys. J. 2008 95: 352-365; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.127431. [Abstract] [Full Text] [PDF] [Supplement]  

Anna Sigrid Pii Svane, Kasper Jahn, Taru Deva, Anders Malmendal, Daniel Erik Otzen, Jens Dittmer, and Niels Chr. Nielsen

Early Stages of Amyloid Fibril Formation Studied by Liquid-State NMR: The Peptide Hormone Glucagon
Biophys. J. 2008 95: 366-377; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.122895. [Abstract] [Full Text] [PDF]  

Gert-Jan Kremers, Erik B. van Munster, Joachim Goedhart, and Theodorus W. J. Gadella, Jr.

Quantitative Lifetime Unmixing of Multiexponentially Decaying Fluorophores Using Single-Frequency Fluorescence Lifetime Imaging Microscopy
Biophys. J. 2008 95: 378-389; Published ahead of print on March 21, 2008 as doi:10.1529/biophysj.107.125229. [Abstract] [Full Text] [PDF] [Supplement]  

Jonas Ries, Eugene P. Petrov, and Petra Schwille

Total Internal Reflection Fluorescence Correlation Spectroscopy: Effects of Lateral Diffusion and Surface-Generated Fluorescence
Biophys. J. 2008 95: 390-399; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.126193. [Abstract] [Full Text] [PDF]  

Adam D. Hoppe, Spencer L. Shorte, Joel A. Swanson, and Rainer Heintzmann

Three-Dimensional FRET Reconstruction Microscopy for Analysis of Dynamic Molecular Interactions in Live Cells
Biophys. J. 2008 95: 400-418; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.125385. [Abstract] [Full Text] [PDF] [Supplement]  

W. Liu, Vedrana Montana, Vladimir Parpura, and U. Mohideen

Comparative Energy Measurements in Single Molecule Interactions
Biophys. J. 2008 95: 419-425; Published ahead of print on March 28, 2008 as doi:10.1529/biophysj.107.127886. [Abstract] [Full Text] [PDF]  

Elias M. Puchner, Gereon Franzen, Mathias Gautel, and Hermann E. Gaub

Comparing Proteins by Their Unfolding Pattern
Biophys. J. 2008 95: 426-434. [Abstract] [Full Text] [PDF]  

CELL BIOPHYSICS:

Yasuhiro M. Umemura, Marija Vrljic, Stefanie Y. Nishimura, Takahiro K. Fujiwara, Kenichi G. N. Suzuki, and Akihiro Kusumi

Both MHC Class II and its GPI-Anchored Form Undergo Hop Diffusion as Observed by Single-Molecule Tracking
Biophys. J. 2008 95: 435-450; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.123018. [Abstract] [Full Text] [PDF] [Supplement]  

Sourav Ganguly, Thomas J. Pucadyil, and Amitabha Chattopadhyay

Actin Cytoskeleton-Dependent Dynamics of the Human Serotonin_1A Receptor Correlates with Receptor Signaling
Biophys. J. 2008 95: 451-463; Published ahead of print on March 13, 2008 as doi:10.1529/biophysj.107.125732. [Abstract] [Full Text] [PDF]  

Núria Gavara, Pere Roca-Cusachs, Raimon Sunyer, Ramon Farré, and Daniel Navajas

Mapping Cell-Matrix Stresses during Stretch Reveals Inelastic Reorganization of the Cytoskeleton
Biophys. J. 2008 95: 464-471; Published ahead of print on March 21, 2008 as doi:10.1529/biophysj.107.124180. [Abstract] [Full Text] [PDF] [Supplement]  

Kathleen A. Lesich, Dominic W. Pelle, and Charles B. Lindemann

Insights into the Mechanism of ADP Action on Flagellar Motility Derived from Studies on Bull Sperm
Biophys. J. 2008 95: 472-482; Published ahead of print on March 28, 2008 as doi:10.1529/biophysj.107.127951. [Abstract] [Full Text] [PDF] [Supplement]  

Nathan J. Evans and Jeffery W. Walker

Endothelin Receptor Dimers Evaluated by FRET, Ligand Binding, and Calcium Mobilization
Biophys. J. 2008 95: 483-492; Published ahead of print on April 18, 2008 as doi:10.1529/biophysj.107.119206. [Abstract] [Full Text] [PDF]  

CORRECTIONS:

Corrections:
Biophys. J. 2008 95: 493(1) [Full Text] [PDF]  

Corrections:
Biophys. J. 2008 95: 493(1) [Full Text] [PDF]  

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